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Merck KGaA cdk inhibitor ro-3306
Cdk Inhibitor Ro 3306, supplied by Merck KGaA, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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( A ) 3D reconstruction of immunofluorescence images. Arrow indicates mitotic cell. Arrowhead indicates the corresponding apical footprint. DNA: Hoechst 33342, actin: Alexa488-phalloidin, tight junctions: anti-ZO-1. ( B ) Quantification of the perimeter of the apical footprint of mitotic cells compared to interphase cells. The apical footprint was determined from anti-ZO1 immunofluorescence. Each data point represents the ratio between the apical perimeter of a mitotic cell and the average apical perimeter of 4 of its interphase neighbors. n = 10. ( C ) 3D reconstruction of immunofluorescence images. Arrow indicates mitotic cell. Arrowhead indicates the corresponding apical footprint. DNA was labeled with Hoechst 33342. Organoids transduced with MRLC2-mScarlet were used to report on myosin localization. This process can generate mosaic organoids, in which only a subset of cells expresses the transgene, allowing for assignment of the myosin localization to specific cells. ( D ) Frames from time-lapse imaging of a mitotic cell in a live organoid in which microtubule plus-ends are labeled with EB3-GFP. ( E ) Fluorescent image of a metaphase cell in a live organoid, in which DNA is fluorescently labeled with H2B-mScarlet. The membranes of a subset of cells within the organoid have been labeled with GFP by inducing low levels of recombination of the R26 mTmG reporter (for example, see ) with an inducible, pan-intestinal epithelial Cre ( Vil1 CreER ). Arrowheads indicate thin membranous processes that maintain the connection of the mitotic cell to the basal surface. ( F ) Fluorescent images of anaphase cells in live Vil1 CreER ; R26 mTmG organoids, induced as in to stochastically label a subset of cell membranes in the organoid. Arrowheads indicate membranous processes. Far right panel represents a later time point of the cell shown in . Images scaled with ɣ adjustment. Although membranous processes are inherited by only one daughter during division in the developing kidney , in the intestine we found that both daughters inherited processes (23/25 anaphases have at least one process per daughter cell). Consistent with symmetric inheritance of these processes, we observed that daughters re-established full contact with the basal surface at highly similar rates after division: daughters reestablished full contact with the basal surface within 4 ± 4 min (SD) of one another. ( G ) Quantification of anaphase spindle orientation compared to the plane of the epithelium following vehicle and Latrunculin A treatment, on a 0–90° scale, n = 10. ( H ) Quantification of chromosome movements in organoids following mitotic arrest and induced mitotic exit. Mitotic arrest was induced by 45 min treatment with S-trityl-L-cysteine (STLC). Mitotic exit was subsequently induced by pharmacological disruption of the spindle assembly checkpoint (SAC, using the Mps1 inhibitor AZ3146) or cyclin-dependent kinase <t>(CDK,</t> using the CDK <t>inhibitor</t> <t>RO-3306).</t> Each arrow corresponds to the position of the DNA from one cell, before and after SAC/CDK inhibition, normalized to the total apical-basal distance of the epithelium. Arrowheads point towards the end position. The end point was defined as chromosome decondensation for the +SAC and +CDK inhibitors conditions. Since the control case does not undergo mitotic exit, the end point was defined as the end of the experiment, after 3 hr of imaging, which is substantially before the organoid begins to die from the treatment. n = 5, ***: p<0.001, ANOVA of distances moved (end position – start position). ( I ) Schematic of assay used to assess chromosome movements in organoids following mitotic arrest with STLC, pharmacological disruption of the cytoskeleton, and induction of mitotic exit with the SAC inhibitor AZ3146 . ( J ) Frames from time-lapse imaging of cells in live organoids treated with the Plk1 inhibitor BI2536 to inhibit cytokinesis. DNA was labeled with H2B-mScarlet. Membrane (labeled with R26 mTmG ) shows absence of cytokinetic furrow ingression. Arrowheads indicate daughter nuclei. Time following BI2536 addition is indicated. We note a significant delay in the observation of pharmacological effects on the organoids compared to cultured cells, allowing for initial chromosome alignment and satisfaction of the SAC before the effects of the BI2536 were observed. Plk1 inhibition was used to inhibit cytokinesis since blebbistatin, a myosin II inhibitor, did not disrupt cytokinesis at the limits of its solubility in this system. Scale bars, 10 µm.
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( A ) Schematic of DNA fiber analysis. Green tracks, CldU; red tracks, IdU. ( B ) Schematic drawing and representative images of two replication signals from DNA fibers. At the top, two DNA replication forks moved bidirectionally from an origin (indicated by the diverging black arrows) that was activated before the CIdU pulse. Each fork was labeled with both IdU (red) and CldU (green). At the bottom, the replication bubble resulting from an origin that was activated during the CldU pulse produces a green-only signal. ( C ) Summary of new origins fired during labeling with CldU. The frequency (as a percentage) was calculated as the number of green signals (b in panel B) divided by the total (a + b) of green (b) plus green/red signals (a in panel B). Results are from three independent experiment results ( T -test, * p < 0.05, ** p < 0.01). ( D ) CHK1 inhibition led to increased levels of nonextractable Cdc45 protein in MCF-7/C6 cells. The cells treated with AZD7762 (100 nM) for the indicated time were incubated with extraction buffer for 5 min on ice, and processed for Western blotting (top panel). The whole lysate protein is used as a control (bottom panel). ( E ) Measurement of Cdc45 chromatin loading after preextraction of cells with detergent by immunostaining. Cells presenting with Cdc45 staining were considered positive. The results are from three independent experiments. Error bars represent the SD of three independent experiments ( T -test, ** p < 0.01). ( F ) Representative Cdc45 staining (green) in MCF-7 and MCF-7/C6 cells are presented. Cell nuclei were stained with DAPI (blue). ( G )The effect of CHK1 inhibition on RS in RBCC depends on Cdk activity. Cdk activity was inhibited by inhibitor <t>Ro3306.</t>
Cdk Inhibitor Ro3306, supplied by Tocris, used in various techniques. Bioz Stars score: 95/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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( A ) 3D reconstruction of immunofluorescence images. Arrow indicates mitotic cell. Arrowhead indicates the corresponding apical footprint. DNA: Hoechst 33342, actin: Alexa488-phalloidin, tight junctions: anti-ZO-1. ( B ) Quantification of the perimeter of the apical footprint of mitotic cells compared to interphase cells. The apical footprint was determined from anti-ZO1 immunofluorescence. Each data point represents the ratio between the apical perimeter of a mitotic cell and the average apical perimeter of 4 of its interphase neighbors. n = 10. ( C ) 3D reconstruction of immunofluorescence images. Arrow indicates mitotic cell. Arrowhead indicates the corresponding apical footprint. DNA was labeled with Hoechst 33342. Organoids transduced with MRLC2-mScarlet were used to report on myosin localization. This process can generate mosaic organoids, in which only a subset of cells expresses the transgene, allowing for assignment of the myosin localization to specific cells. ( D ) Frames from time-lapse imaging of a mitotic cell in a live organoid in which microtubule plus-ends are labeled with EB3-GFP. ( E ) Fluorescent image of a metaphase cell in a live organoid, in which DNA is fluorescently labeled with H2B-mScarlet. The membranes of a subset of cells within the organoid have been labeled with GFP by inducing low levels of recombination of the R26 mTmG reporter (for example, see ) with an inducible, pan-intestinal epithelial Cre ( Vil1 CreER ). Arrowheads indicate thin membranous processes that maintain the connection of the mitotic cell to the basal surface. ( F ) Fluorescent images of anaphase cells in live Vil1 CreER ; R26 mTmG organoids, induced as in to stochastically label a subset of cell membranes in the organoid. Arrowheads indicate membranous processes. Far right panel represents a later time point of the cell shown in . Images scaled with ɣ adjustment. Although membranous processes are inherited by only one daughter during division in the developing kidney , in the intestine we found that both daughters inherited processes (23/25 anaphases have at least one process per daughter cell). Consistent with symmetric inheritance of these processes, we observed that daughters re-established full contact with the basal surface at highly similar rates after division: daughters reestablished full contact with the basal surface within 4 ± 4 min (SD) of one another. ( G ) Quantification of anaphase spindle orientation compared to the plane of the epithelium following vehicle and Latrunculin A treatment, on a 0–90° scale, n = 10. ( H ) Quantification of chromosome movements in organoids following mitotic arrest and induced mitotic exit. Mitotic arrest was induced by 45 min treatment with S-trityl-L-cysteine (STLC). Mitotic exit was subsequently induced by pharmacological disruption of the spindle assembly checkpoint (SAC, using the Mps1 inhibitor AZ3146) or cyclin-dependent kinase (CDK, using the CDK inhibitor RO-3306). Each arrow corresponds to the position of the DNA from one cell, before and after SAC/CDK inhibition, normalized to the total apical-basal distance of the epithelium. Arrowheads point towards the end position. The end point was defined as chromosome decondensation for the +SAC and +CDK inhibitors conditions. Since the control case does not undergo mitotic exit, the end point was defined as the end of the experiment, after 3 hr of imaging, which is substantially before the organoid begins to die from the treatment. n = 5, ***: p<0.001, ANOVA of distances moved (end position – start position). ( I ) Schematic of assay used to assess chromosome movements in organoids following mitotic arrest with STLC, pharmacological disruption of the cytoskeleton, and induction of mitotic exit with the SAC inhibitor AZ3146 . ( J ) Frames from time-lapse imaging of cells in live organoids treated with the Plk1 inhibitor BI2536 to inhibit cytokinesis. DNA was labeled with H2B-mScarlet. Membrane (labeled with R26 mTmG ) shows absence of cytokinetic furrow ingression. Arrowheads indicate daughter nuclei. Time following BI2536 addition is indicated. We note a significant delay in the observation of pharmacological effects on the organoids compared to cultured cells, allowing for initial chromosome alignment and satisfaction of the SAC before the effects of the BI2536 were observed. Plk1 inhibition was used to inhibit cytokinesis since blebbistatin, a myosin II inhibitor, did not disrupt cytokinesis at the limits of its solubility in this system. Scale bars, 10 µm.

Journal: eLife

Article Title: Cellular aspect ratio and cell division mechanics underlie the patterning of cell progeny in diverse mammalian epithelia

doi: 10.7554/eLife.36739

Figure Lengend Snippet: ( A ) 3D reconstruction of immunofluorescence images. Arrow indicates mitotic cell. Arrowhead indicates the corresponding apical footprint. DNA: Hoechst 33342, actin: Alexa488-phalloidin, tight junctions: anti-ZO-1. ( B ) Quantification of the perimeter of the apical footprint of mitotic cells compared to interphase cells. The apical footprint was determined from anti-ZO1 immunofluorescence. Each data point represents the ratio between the apical perimeter of a mitotic cell and the average apical perimeter of 4 of its interphase neighbors. n = 10. ( C ) 3D reconstruction of immunofluorescence images. Arrow indicates mitotic cell. Arrowhead indicates the corresponding apical footprint. DNA was labeled with Hoechst 33342. Organoids transduced with MRLC2-mScarlet were used to report on myosin localization. This process can generate mosaic organoids, in which only a subset of cells expresses the transgene, allowing for assignment of the myosin localization to specific cells. ( D ) Frames from time-lapse imaging of a mitotic cell in a live organoid in which microtubule plus-ends are labeled with EB3-GFP. ( E ) Fluorescent image of a metaphase cell in a live organoid, in which DNA is fluorescently labeled with H2B-mScarlet. The membranes of a subset of cells within the organoid have been labeled with GFP by inducing low levels of recombination of the R26 mTmG reporter (for example, see ) with an inducible, pan-intestinal epithelial Cre ( Vil1 CreER ). Arrowheads indicate thin membranous processes that maintain the connection of the mitotic cell to the basal surface. ( F ) Fluorescent images of anaphase cells in live Vil1 CreER ; R26 mTmG organoids, induced as in to stochastically label a subset of cell membranes in the organoid. Arrowheads indicate membranous processes. Far right panel represents a later time point of the cell shown in . Images scaled with ɣ adjustment. Although membranous processes are inherited by only one daughter during division in the developing kidney , in the intestine we found that both daughters inherited processes (23/25 anaphases have at least one process per daughter cell). Consistent with symmetric inheritance of these processes, we observed that daughters re-established full contact with the basal surface at highly similar rates after division: daughters reestablished full contact with the basal surface within 4 ± 4 min (SD) of one another. ( G ) Quantification of anaphase spindle orientation compared to the plane of the epithelium following vehicle and Latrunculin A treatment, on a 0–90° scale, n = 10. ( H ) Quantification of chromosome movements in organoids following mitotic arrest and induced mitotic exit. Mitotic arrest was induced by 45 min treatment with S-trityl-L-cysteine (STLC). Mitotic exit was subsequently induced by pharmacological disruption of the spindle assembly checkpoint (SAC, using the Mps1 inhibitor AZ3146) or cyclin-dependent kinase (CDK, using the CDK inhibitor RO-3306). Each arrow corresponds to the position of the DNA from one cell, before and after SAC/CDK inhibition, normalized to the total apical-basal distance of the epithelium. Arrowheads point towards the end position. The end point was defined as chromosome decondensation for the +SAC and +CDK inhibitors conditions. Since the control case does not undergo mitotic exit, the end point was defined as the end of the experiment, after 3 hr of imaging, which is substantially before the organoid begins to die from the treatment. n = 5, ***: p<0.001, ANOVA of distances moved (end position – start position). ( I ) Schematic of assay used to assess chromosome movements in organoids following mitotic arrest with STLC, pharmacological disruption of the cytoskeleton, and induction of mitotic exit with the SAC inhibitor AZ3146 . ( J ) Frames from time-lapse imaging of cells in live organoids treated with the Plk1 inhibitor BI2536 to inhibit cytokinesis. DNA was labeled with H2B-mScarlet. Membrane (labeled with R26 mTmG ) shows absence of cytokinetic furrow ingression. Arrowheads indicate daughter nuclei. Time following BI2536 addition is indicated. We note a significant delay in the observation of pharmacological effects on the organoids compared to cultured cells, allowing for initial chromosome alignment and satisfaction of the SAC before the effects of the BI2536 were observed. Plk1 inhibition was used to inhibit cytokinesis since blebbistatin, a myosin II inhibitor, did not disrupt cytokinesis at the limits of its solubility in this system. Scale bars, 10 µm.

Article Snippet: RO-3306 , CDK inhibitor , Calbiochem , 217699 , 10 μM.

Techniques: Immunofluorescence, Labeling, Transduction, Imaging, Disruption, Inhibition, Control, Membrane, Cell Culture, Solubility

Small molecules used in this study.

Journal: eLife

Article Title: Cellular aspect ratio and cell division mechanics underlie the patterning of cell progeny in diverse mammalian epithelia

doi: 10.7554/eLife.36739

Figure Lengend Snippet: Small molecules used in this study.

Article Snippet: RO-3306 , CDK inhibitor , Calbiochem , 217699 , 10 μM.

Techniques: Concentration Assay

( A ) Schematic of DNA fiber analysis. Green tracks, CldU; red tracks, IdU. ( B ) Schematic drawing and representative images of two replication signals from DNA fibers. At the top, two DNA replication forks moved bidirectionally from an origin (indicated by the diverging black arrows) that was activated before the CIdU pulse. Each fork was labeled with both IdU (red) and CldU (green). At the bottom, the replication bubble resulting from an origin that was activated during the CldU pulse produces a green-only signal. ( C ) Summary of new origins fired during labeling with CldU. The frequency (as a percentage) was calculated as the number of green signals (b in panel B) divided by the total (a + b) of green (b) plus green/red signals (a in panel B). Results are from three independent experiment results ( T -test, * p < 0.05, ** p < 0.01). ( D ) CHK1 inhibition led to increased levels of nonextractable Cdc45 protein in MCF-7/C6 cells. The cells treated with AZD7762 (100 nM) for the indicated time were incubated with extraction buffer for 5 min on ice, and processed for Western blotting (top panel). The whole lysate protein is used as a control (bottom panel). ( E ) Measurement of Cdc45 chromatin loading after preextraction of cells with detergent by immunostaining. Cells presenting with Cdc45 staining were considered positive. The results are from three independent experiments. Error bars represent the SD of three independent experiments ( T -test, ** p < 0.01). ( F ) Representative Cdc45 staining (green) in MCF-7 and MCF-7/C6 cells are presented. Cell nuclei were stained with DAPI (blue). ( G )The effect of CHK1 inhibition on RS in RBCC depends on Cdk activity. Cdk activity was inhibited by inhibitor Ro3306.

Journal: Oncotarget

Article Title: Targeting radioresistant breast cancer cells by single agent CHK1 inhibitor via enhancing replication stress

doi: 10.18632/oncotarget.9156

Figure Lengend Snippet: ( A ) Schematic of DNA fiber analysis. Green tracks, CldU; red tracks, IdU. ( B ) Schematic drawing and representative images of two replication signals from DNA fibers. At the top, two DNA replication forks moved bidirectionally from an origin (indicated by the diverging black arrows) that was activated before the CIdU pulse. Each fork was labeled with both IdU (red) and CldU (green). At the bottom, the replication bubble resulting from an origin that was activated during the CldU pulse produces a green-only signal. ( C ) Summary of new origins fired during labeling with CldU. The frequency (as a percentage) was calculated as the number of green signals (b in panel B) divided by the total (a + b) of green (b) plus green/red signals (a in panel B). Results are from three independent experiment results ( T -test, * p < 0.05, ** p < 0.01). ( D ) CHK1 inhibition led to increased levels of nonextractable Cdc45 protein in MCF-7/C6 cells. The cells treated with AZD7762 (100 nM) for the indicated time were incubated with extraction buffer for 5 min on ice, and processed for Western blotting (top panel). The whole lysate protein is used as a control (bottom panel). ( E ) Measurement of Cdc45 chromatin loading after preextraction of cells with detergent by immunostaining. Cells presenting with Cdc45 staining were considered positive. The results are from three independent experiments. Error bars represent the SD of three independent experiments ( T -test, ** p < 0.01). ( F ) Representative Cdc45 staining (green) in MCF-7 and MCF-7/C6 cells are presented. Cell nuclei were stained with DAPI (blue). ( G )The effect of CHK1 inhibition on RS in RBCC depends on Cdk activity. Cdk activity was inhibited by inhibitor Ro3306.

Article Snippet: The Cdk inhibitor Ro3306 was purchased from Tocris.

Techniques: Labeling, Inhibition, Incubation, Extraction, Western Blot, Control, Immunostaining, Staining, Activity Assay